attioli
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Beyond the gene: Decoding alternative isoforms
An invited review on how alternative isoforms expand the functional output of the genome and why they matter in disease.
Mattioli K
,
Bulyk ML
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Source Document
Widespread variation in molecular interactions and regulatory properties among transcription factor isoforms
Systematic comparison of transcription factor isoforms revealing widespread divergence in DNA binding, protein interactions, and regulatory activity, often linked to intrinsically disordered regions and misregulated in tumors.
Lambourne L
,
Mattioli K
,
Santoso C
,
Sheynkman G
,
Inukai S
,
Kaundal B
,
Berenson A
,
Spirohn-Fitzgerald K
,
Bhattacharjee A
,
Rothman E
,
Shrestha S
,
Laval F
,
Carroll BS
,
Plassmeyer SP
,
Emenecker RJ
,
Yang Z
,
Bisht D
,
Sewell JA
,
Li G
,
Prasad A
,
Phanor S
,
Lane R
,
Moyer DC
,
Hunt T
,
Balcha D
,
Gebbia M
,
Twizere J
,
Hao T
,
Holehouse AS
,
Frankish A
,
Riback JA
,
Salomonis N
,
Calderwood MA
,
Hill DE
,
Sahni N
,
Vidal M
,
Bulyk ML
,
Fuxman Bass JI
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Source Document
AKT and EZH2 inhibitors kill TNBCs by hijacking mechanisms of involution
Schade AE
,
Perurena N
,
Yang Y
,
Rodriguez CL
,
Krishnan A
,
Gardner A
,
Loi P
,
Xu Y
,
Nguyen VTM
,
Mastellone GM
,
Pilla NF
,
Watanabe M
,
Ota K
,
Davis RA
,
Mattioli K
,
Xiang D
,
Zoeller JJ
,
Lin J-R
,
Morganti S
,
Garrido-Castro AC
,
Tolaney SM
,
Li Z
,
Barbie DA
,
Sorger PK
,
Helin K
,
Santagata S
,
Knott SRV
,
Cichowski K
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Source Document
Epigenetic and oncogenic inhibitors cooperatively drive differentiation and kill KRAS-mutant colorectal cancers
Loi P
,
Schade AE
,
Rodriguez CL
,
Krishnan A
,
Perurena N
,
Nguyen VTM
,
Xu Y
,
Watanabe M
,
Davis RA
,
Gardner A
,
Pilla NF
,
Mattioli K
,
Popow O
,
Gunduz N
,
Lannagan TRM
,
Fitzgerald S
,
Sicinska ET
,
Lin JR
,
Tan W
,
Brais LK
,
Haigis KM
,
Giannakis M
,
Ng K
,
Santagata S
,
Helin K
,
Sansom OJ
,
Cichowski K
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Source Document
Determinants of gastric cancer immune escape identified from non-coding immune-landscape quantitative trait loci
Miliotis C
,
Ma Y
,
Katopodi X
,
Karagkouni D
,
Kanata E
,
Mattioli K
,
Kalavros N
,
Pita-Juárez YH
,
Batalini F
,
Ramnarine VR
,
Nanda S
,
Slack FJ
,
Vlachos IS
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Source Document
Systematic characterization of regulatory variants of blood pressure genes
Oliveros W
,
Delfosse K
,
Lato DF
,
Kiriakopulos K
,
Mokhtaridoost M
,
Said A
,
McMurray BJ
,
Browning JWL
,
Mattioli K
,
Meng G
,
Ellis J
,
Mital S
,
Melé M
,
Maass PG
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Source Document
Combating castration-resistant prostate cancer by co-targeting the epigenetic regulators EZH2 and HDAC
Schade AE
,
Kuzmickas R
,
Rodriguez CL
,
Mattioli K
,
Enos M
,
Gardner A
,
Cichowski K
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Source Document
Whole genome sequencing delineates regulatory, copy number, and cryptic splice variants in early onset cardiomyopathy
Lesurf R
,
Said A
,
Akinrinade O
,
Breckpot J
,
Delfosse K
,
Liu T
,
Yao R
,
Persad G
,
McKenna F
,
Noche RR
,
Oliveros W
,
Mattioli K
,
Shah S
,
Miron A
,
Yang Q
,
Meng G
,
Et Al.
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Source Document
Genome-wide CRISPR interference screen identifies lncRNA loci required for pluripotency and differentiation
Haswell JR
,
Mattioli K
,
Gerhardinger C
,
Foster DJ
,
Fernandez PP
,
Maass PG
,
Rinn JL
,
Slack FJ
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Source Document
Cis and trans effects differentially contribute to the evolution of promoters and enhancers
Mattioli K
,
Gerhardinger C
,
Andergassen D
,
Maass PG
,
Rinn JL
,
Melé M
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Source Document
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